BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011G11LP1|AL426271
(796 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1482 1538 0.0
>3x_Contig1482
Length = 10060
Score = 1538 bits (775), Expect = 0.0
Identities = 790/796 (99%)
Strand = Plus / Minus
Query: 1 gatcaaaagaaggacaaagaattcgattcatcaaaggctttctctggttacttcctattt 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6445 gatcaaaagaaggacaaagaattcgattcatcaaaggctttccctggttacttcctattt 6386
Query: 61 gttgaagaagakaccttcaaaagcaccccagatcatttgaaattgccaaaaaatttgaag 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6385 gttgaagaagagaccttcaaaagcaccccagatcatttgaaattgccaaaaaatttgaag 6326
Query: 121 attgacaaaactgcattagaactaccagatgatgcgtttgattcattagaagagaatcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6325 attgacaaaactgcattagaactaccagatgatgcgtttgattcattagaagagaatcaa 6266
Query: 181 atgaaactagatccaaggactgaaaaaatatctaaatttttagacgatgacgttttccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6265 atgaaactagatccaaggactgaaaaaatatctaaatttttagacgatgacgttttccaa 6206
Query: 241 aagttccaagaagttgtcagttacaacccgggacaagttttacgttacgatttgggagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6205 aagttccaagaagttgtcagttacaacccgggacaagttttacgttacgatttgggagga 6146
Query: 301 cttcctctttactatgccaaaactccaaaggagtttgaggatttggttgctaaacctgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6145 cttcctctttactatgccaaaactccaaaggagtttgaggatttggttgctaaacctgca 6086
Query: 361 tataatccttcgtcgagaagggtgtttgaaatgcaactaatgcctaagatgatattagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6085 tataatccttcgtcgagaagggtgtttgaaatgcaactaatgcctaagatgatattagat 6026
Query: 421 cttgaggaagaggtgtcattgactgatggtatggattggggcaccatcatggtgtatacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6025 cttgaggaagaggtgtcattgactgatggtatggattggggcaccatcatggtgtatacc 5966
Query: 481 gacatcgagaattacattccaaaattcgatgagaatcaagttggctacgtacaggaagtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5965 gacatcgagaattacattccaaaattcgatgagaatcaagttggctacgtacaggaagtc 5906
Query: 541 gtcaaggttcagtgggaacccattgattatgacgaatcaanaggttgatagaatcattgt 600
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 5905 gtcaaggttcagtgggaacccattgattatgacgaagtcaaaggttgatagaatcattgt 5846
Query: 601 atggagtaaaactcatgtttttataggctgcattcataaatatatacatggaaattagtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5845 atggagtaaaactcatgtttttataggctgcattcataaatatatacatggaaattagtt 5786
Query: 661 ttaatctatttacaagaaacggggaattttaacactctcgtaaactataagtttgtcacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5785 ttaatctatttacaagaaacggggaattttaacactctcgtaaactataagtttgtcacc 5726
Query: 721 agcctggtatccttcaaaatcgttctctaacgtaataccacattcgttgcctttattgac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5725 agcctggtatccttcaaaatcgttctctaacgtaataccacattcgttgcctttattgac 5666
Query: 781 atcttgaacagtttct 796
||||||||||||||||
Sbjct: 5665 atcttgaacagtttct 5650
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6817
Number of Sequences: 1807
Number of extensions: 6817
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 796
length of database: 10,358,551
effective HSP length: 16
effective length of query: 780
effective length of database: 10,329,639
effective search space: 8057118420
effective search space used: 8057118420
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)